Advanced Molecular and Cellular Biology

Bio 4751

Spring 2007

 

Time: 11:00AM MWF

                       

Requirements: Previous coursework in molecular biology and genetics.

 

Instructor: Gary A. Bulla, Ph.D.

 

Office:  Life Sciences Building Rm 2027, Phone: 217-581-3499, Office hours:  9-11 MW or by appointment.   E-mail:  gabulla@eiu.edu  If not in my office, I will leave a note on my door indicating my location.

 

Required lecture text: Molecular Biology of the Cell, 4th ed., Bruce Alberts et al., 2002, Garland Science (publishers), ISBN 0-8153-3218-1.  Make sure your copy contains a CD-ROM.

Course Description:  Topics covered will focus on cell signaling in eukaryotic cells, primarily mammals (although other model systems will be discussed).

Course goals-

  1. To learn the molecular underpinnings of eukaryotic cell signaling.
  2. To learn to read and understand current research articles.
  3. To develop scientific presentation skills.   

Course Web Site:      www.ux1.eiu.edu/~gabulla      Note: the “l” in “ux1” is the number 1

To print lecture slides-

Click on “Bio4751”, then click on Chapter 1 under the “Powerpoint” column.

Click on  “File” menu, then click on “Print”.

In pop-up window, select

·        “Slides” in “Print Range” box

·        “Handouts” from “Print What:” menu

·        “Pure Black and White” from “Color/Grayscale” menu

·        “6” slides per page in “Handout” box

·        “OK” to print

 

Format and grading :

The first half of the course will consist of a series of lectures by Dr. Bulla. The second half will consist of presentations by individual students covering a variety of topics concerning signal transduction.

 

Written questions: (10%) Once student presentations begin, each week students will receive a number of journal articles and a list of questions covering the articles.  The answers to the questions will be due by 10AM on the day of the class at which the paper will be discussed. Answers should be brief and to the point. Answers can be placed in Dr. Bulla’s mail slot in the Biology office or brought to class.

 

Presentations: (15%) Each student will be assigned to lead a class discussion covering primary articles 1-2  times during the course.  Students must use a digital presentation format (e.g. powerpoint), although chalk or overheads can also be used in addition to the digital presentation.  The presentation should include historical perspective, key concepts addressed in the articles, the key experiments, a critical assessment of the experimental design and results, and possible future experiments. Your presentation should draw others into the discussion, rather than simply lecturing on the topic. Note: Each student is responsible for providing a copy of the primary article and a question set no later than one week prior to the presentation. 

 

Exams: (60%)  Three exams will be given. Each will comprise 20% of the final grade. Material covered will include material presented by Dr. Bulla and by student presentations. Review sheets will be provided prior to exams.

 

Class participation: (15%)  It is expected that each student will be actively engaged in discussions of assigned articles. Also, each student will give a 5-minute short-talk on a current topic “in the news” involving signal transduction.

 

Grading Policy:  Grades are derived from an accumulated score of 100 percentage points: 

 A = 90 to 100 %, B = 80 to 89%, C = 70 to 79%, D = 60 to 69%, and F = less than 60%. 

Policy Statement on Examinations:  Exam times are indicated on the course schedule.  Exams missed because of documented illness may be made up.

Disability Policy:  To request academic accommodations due to a disability, please contact me so that we can discuss the accommodations you might need in class.

Attendance Policy:  Class attendance is mandatory.  Any absences must be brought to my attention prior to the absence.


 

SCHEDULE    

BIO4751:  Advanced Molecular and Cellular Biology

 

Spring 2007

1/2/07 update

 

Gary Bulla, Ph.D.

11AM MWF

 

Month

Date

Day

Tentative Lecture Topic

Chapter 15

Jan

8

Mon

Signal transduction overview

 

 

10

Wed

Part I- General signaling strategies

831-852, and Ch 10

 

12

Fri

                                           

 

 

15

Mon

No class  -MLK Day

 

 

17

Wed

                                         

 

 

19

Fri

Part II- G protein signaling

852-853

 

22

Mon

                                       “ - cAMP

854-858

 

24

Wed

                                        “ - PLC

859-861

 

26

Fri

                                          -Calcium

861-871

 

29

Mon

Part III- Enzyme-linked cell surface receptors

871-875

 

31

Wed

EXAM I- Part I and Part II

 

 Feb

2

Fri

Part III- (Continued)            -Ras 

876-880

 

5

Mon

Powerpoint presentation information

 

 

7

Wed

Part III- (Continued) – PI3 kinase

880-882

 

9

Fri

                    - Jak-STAT and TGF-b

884-892

 

12

Mon

Part IV-   Proteolysis-dependent signaling- Notch

893-895

 

14

Wed

                               - Wnt and NFkB

895-899

 

16

Fri

No Class – Presidents’ Day

 

 

19

Mon

Techniques

469-580 (Chapter 8-9)

 

21

Wed

Student presentation

 

 

23

Fri

Student presentation

 

 

26

Mon

Apoptosis

 

 

28

Wed

EXAM II-Midterm

 

Mar

2

Fri

Student presentation

 

 

5

Mon

TBA

 

 

7

Wed

Student presentation

 

 

9

Fri

Student presentation

 

 

12-16

Mon-Fri

No Class-Spring Break

 

 

19

Mon

TBA

 

 

21

Wed

Student presentation

 

 

23

Fri

Student presentation

 

 

26

Mon

TBA

 

 

27

Wed

Student presentation

 

 

30

Fri

Student presentation

 

Apr

2

Mon

TBA

 

 

4

Wed

Student presentation

 

 

6

Fri

Student presentation

 

 

9

Mon

TBA

 

 

11

Wed

Student presentation

 

 

13

Fri

Student presentation

 

 

16

Mon

TBA

 

 

18

Wed

Student presentation

 

 

20

Fri

Student presentation

 

 

23

Mon

TBA

 

 

25

Wed

Student presentation

 

 

27

Fri

Student presentation

 

May

2

Wed

Final Exam 10:15PM-12:15PM

 

 

Important Dates:

 

 

Deadline to Add Courses - Jan 12

Deadline to Drop a Course with No Grade-  Jan 22 (4 P.M.)

Deadline to Withdraw from a Course or University with W- Mar 30